Mohammed's Journal
Class Goals
before after
---- ----
1 | 5 | Goal 0: articulate VR visualization software tool goals, requirements, and capabilities
1 | 4 | Goal 1: construct meaningful evaluation strategies for software libraries, frameworks, and applications
2 | 4 | Goal 2: execute tool evaluation strategies
1 | 5 | Goal 3: build visualization software packages
4 | 5 | Goal 4: comparatively analyze software tools based on evaluation
1 | 5 | Goal 5: be familiar with a number of VR software tools and hardware
4 | 5 | Goal 6: think critically about software
2 | 4 | Goal 7: communicate ideas more clearly
ALL OTHER WIKI CONTRIBUTIONS
CONTRIBUTION 1 [Updated Nanome's landing, install, and features pages] <Landing Page> <Install Page> <Features Page>
CONTRIBUTION 2 [A Detailed Report Evaluating Nanome using 4 Different Methods] <HERE>
CONTRIBUTION 3 [Systematic Review of VR Applications in Pandemic Prevention and Prepardness] <HERE>
CONTRIBUTION 4 [Systematic Review of VR Applications during the SARS-COVID-19 Pandemic] <HERE>
CONTRIBUTION 5 [Nanome & COVID-19 Exploration Activity] <HERE>
HOURS SUMMARY
Total: 77
30/01/23 - 3 Hours
Read the following:
Kitson A, Prpa M and Riecke BE (2018) Immersive Interactive Technologies for Positive Change: A Scoping Review and Design Considerations.
Riva G, Baños RM, Botella C, Mantovani F and Gaggioli A (2016) Transforming Experience: The Potential of Augmented Reality and Virtual Reality for Enhancing Personal and Clinical Change
Turner WA, Casey LM. Outcomes associated with virtual reality in psychological interventions: where are we now? Clin Psychol Rev. 2014 Dec;34(8):634-44. doi: 10.1016/j.cpr.2014.10.003. Epub 2014 Oct 18. PMID: 25455627.
01/02/23 - 4 Hours
HW02 (Previous Projects, Hardware & Software, Potential Projects)
Class Goals
Class prep
04/02/23 - 4 Hours
Virtual Desktop, Stream VR & Google Earth Setup
Screenshots from google earth VR (Home - Mieh w Mieh, Fox Point & College Hill)
Video - Trip from Jerusalem, Palestine to Sidon, Lebanon
Tried the rollercoasters
06/02/23 - 4 Hours
Installed DinoVR on Paperspace virtual machine
Read the following:
Asadzadeh A, Samad-Soltani T, Rezaei-Hachesu P. Applications of virtual and augmented reality in infectious disease epidemics with a focus on the COVID-19 outbreak. Inform Med Unlocked. 2021;24:100579. doi: 10.1016/j.imu.2021.100579. Epub 2021 Apr 27. PMID: 33937503; PMCID: PMC8076725.
(2020). An immersive journey to the molecular structure of SARS-CoV-2: Virtual reality in COVID-19. Computational and Structural Biotechnology Journal, 18, 2621-2628. https://doi.org/10.1016/j.csbj.2020.09.018
12/02/23 - 6 Hours
Project one proposal, including motivation, in-class activity, evaluation & timeline
research on Nanome and background information needed for the project
14/02/23 - 3 Hours
practice presentation
Project #1 Milestone #1
16/02/23 - 2 Hours
journal tidying up
journal evaluation - HERE
Milestone #2
16/02/23 - 5 hours
A biochemistry refresher: protease, active sites, identifying the SARS molecule and its main protease
Literature review
23/02/23 - 4 hours
evaluation form <HERE>
evaluating collaboration
started working on the in-class activity
Personal exploration of Nanome
28/02/23 - 4 hours
finalize in-class activity prep
finalize evaluation methods and questions
prep for class
02/03/23 - 5 hours
in-class activity
class prep
Synthesis outcomes from in-class activity and evaluation from <data can be found here>
Personal evaluation activity
07/03/23 - 5 hours
What more can we learn about COVID-19 and similar virus ?
interesting applications in Nanome
comparable software
09/03/23 - 4 hours
VR applications in pandemic prevention and preparedness
VR and molecular visualizations
lots of research
class prep
13/03/23 - 5 hours
finalzing all wiki contributions
journal
class prep
presentation prep
15/03/23 - 6 Hours
Project one presentation
Journal
Self Evaluation
contributions review
20/03/23 - 6 Hours
7 scenarios for visualization evaluation
Project 02 - Topic and Research <here>
Final Project ppt - final update
journal
updated wiki links